リストを表示する[日本語 | English]
氏名: 寺田智樹 / Tomoki P. TERADA
電子メール: terada [at] nagoya-u.jp
居室: 工学部3号館南館4階476号室 内線 3721 (FAX 3719)
連絡先:
〒464-8603 名古屋市千種区不老町
名古屋大学 大学院工学研究科 応用物理学専攻 笹井研究室
052-789-3721, FAX 052-789-3719
研究分野: 生物物理学、タンパク質科学、システム生物学
論文:
PubMed,
Google Scholar,
ResearchGate,
リストを表示する
[Papers]
Tomoki P. Terada, Qing-Miao Nie, Masaki Sasai, "Landscape-Based View on the Stepping Movement of Myosin VI", Journal of Physical Chemistry B 126(38), 7262-7270 (2022-09-15).
Sumita Das, Tomoki P. Terada, Masaki Sasai, "Single-molecular and ensemble-level oscillations of cyanobacterial circadian clock", Biophysics and Physicobiology 15, 136-150 (2018-05-26) (arXiv, bioRxiv).
Sumita Das, Tomoki P. Terada, Masaki Sasai, "Role of ATP Hydrolysis in Cyanobacterial Circadian Oscillator", Scientific Reports 7, 17469 (2017-12-12).
Masaki Sasai, George Chikenji, Tomoki P. Terada, "Cooperativity and modularity in protein folding", Biophysics and Physicobiology 13, 281-293 (2016-11-18) (arXiv, bioRxiv).
Tatsuya Okuno, Koya Kato, Shintaro Minami, Tomoki P. Terada, Masaki Sasai, George Chikenji, "Importance of consensus region of multiple-ligand templates in a virtual screening method", Biophysics and Physicobiology 13, 149-156 (2016-07-14).
Tatsuya Okuno, Koya Kato, Tomoki P. Terada, Masaki Sasai, George Chikenji, "VS-APPLE: A Virtual Screening Algorithm Using Promiscuous Protein–Ligand Complexes", Journal of Chemical Information and Modeling 55(6), 1108–1119 (2015-06-09).
Takashi Inanami, Tomoki P. Terada, Masaki Sasai, "Folding pathway of a multidomain protein depends on its topology of domain connectivity", Proceedings of the National Academy of Sciences of the United States of America 111(45), 15969-15974 (2014-09-29).
Qing-Miao Nie, Akio Togashi, Takeshi N. Sasaki, Mitsunori Takano, Masaki Sasai, Tomoki P. Terada, "Coupling of Lever Arm Swing and Biased Brownian Motion in Actomyosin", PLoS Computational Biology 10(4): e1003552, 1-13 (2014-04-24).
Qing-Miao Nie, Masaki Sasai, Tomoki P. Terada, "Conformational flexibility of loops of myosin enhances the global bias in the actin-myosin interaction landscape", Physical Chemistry Chemical Physics 16(14), 6441-6447 (2014-01-06).
Masaki Sasai, Yudai Kawabata, Koh Makishi, Kazuhito Itoh, Tomoki P. Terada, "Time Scales in Epigenetic Dynamics and Phenotypic Heterogeneity of Embryonic Stem Cells", PLoS Computational Biology 9(12): e1003380, 1-17 (2013-12-12).
Tomoki P. Terada, Toru Kimura, Masaki Sasai, "Entropic Mechanism of Allosteric Communication in Conformational Transitions of Dihydrofolate Reductase", Journal of Physical Chemistry B 117(42), 12864-12877 (2013-05-24).
Naoko Tokuda, Tomoki P. Terada, Masaki Sasai, "Dynamical Modeling of Three-Dimensional Genome Organization in Interphase Budding Yeast", Biophysical Journal 102(3), 296-304 (2012-01-28).
Tetsuro Nagai, Tomoki P. Terada, Masaki Sasai, "Synchronization of Circadian Oscillation of Phosphorylation Level of KaiC in vitro", Biophysical Journal 98(11), 2469-2477 (2010-06-01).
Mitsunori Takano, Tomoki P. Terada, Masaki Sasai, "Unidirectional Brownian motion observed in an in silico single molecule experiment of an actomyosin motor", Proceedings of the National Academy of Sciences of the United States of America 107(17), 7769-7774 (2010-04-12).
Kohei Eguchi, Mitsumasa Yoda, Tomoki P. Terada, Masaki Sasai, "Mechanism of Robust Circadian Oscillation of KaiC Phosphorylation In Vitro", Biophysical Journal 95(4), 1773-1784 (2008-05-23) (arXiv).
Mitsumasa Yoda, Kohei Eguchi, Tomoki P. Terada, Masaki Sasai, "Monomer-Shuffling and Allosteric Transition in KaiC Circadian Oscillation", PLoS ONE 2(5): e208,1-8 (2007-05-02).
Chioko Nagao, Tomoki P. Terada, Tetsuya Yomo, Masaki Sasai, "Correlation between evolutionary structural development and protein folding", Proceedings of the National Academy of Sciences of the United States of America 102(52), 18950-18955 (2005-12-19).
Tomoki P. Terada, Masaki Sasai, Tetsuya Yomo, "Conformational change of actomyosin complex drives the multiple stepping movement", Proceedings of the National Academy of Sciences of the United States of America 99(14), 9202-9206 (2002-06-24).
Tomonao Inobe, Tadashi Makio, Etsuko Takasu-Ishikawa, Tomoki P. Terada, Kunihiro Kuwajima, "Nucleotide binding to the chaperonin GroEL: noncooperative binding of ATP analogs and ADP, and cooperative effect of ATP", Biochimica et Biophysica Acta 1545(1-2), 160-173 (2001-02-06).
Tapan K. Chaudhuri, Munehito Arai, Tomoki P. Terada, Teikichi Ikura, Kunihiro Kuwajima, "Equilibrium and Kinetic Studies on Folding of the Authentic and Recombinant Forms of Human α-Lactalbumin by Circular Dichroism Spectroscopy", Biochemistry 39(50), 15643-15651 (2000-11-18).
Tomoki P. Terada, Kunihiro Kuwajima, "Thermodynamics of nucleotide binding to the chaperonin GroEL studied by isothermal titration calorimetry: evidence for noncooperative nucleotide binding", Biochimica et Biophysica Acta 1431(2), 269-281 (1999-05-21).
Tapan K. Chaudhuri, Katsunori Horii, Takao Yoda, Munehito Arai, Shinji Nagata, Tomoki P. Terada, Hidefumi Uchiyama, Teikichi Ikura, Kouhei Tsumoto, Hiroshi Kataoka, Masaaki Matsushima, Kunihiro Kuwajima, Izumi Kumagai, "Effect of the Extra N-terminal Methionine Residue on the Stability and Folding of Recombinant α-Lactalbumin Expressed in Escherichia coli", Journal of Molecular Biology 285(3), 1179-1194 (1999-01-22).
T.M. Ito, R.S. Hayano, S.N. Nakamura, T.P. Terada, M. Iwasaki, D.R. Gill, L. Lee, A. Olin, M. Salomon, S. Yen, K. Bartlett, G.A. Beer, G. Mason, G. Trayling, H. Outa, T. Taniguchi, Y. Yamashita, R. Seki, "Observation of kaonic hydrogen atom x rays", Physical Review C 58(4), 2366-2382 (1998-10-01).
S.N. Nakamura, M. Iwasaki, K. Bartlett, G.A. Beer, D.R. Gill, R.S. Hayano, T.M. Ito, M. Kuwata, L. Lee, G. Mason, H. Ohkubo, A. Olin, H. Outa, M. Salomon, R. Seki, K. Shibuya, T. Taniguchi, T.P. Terada, G. Trayling, T. Watanabe, Y. Yamashita, S. Yen, "A new approach to measure kaonic hydrogen X-rays", Nuclear Instruments and Methods in Physics Research A 408(2-3), 438-452 (1998-05-11).
M. Iwasaki, R.S. Hayano, T.M. Ito, S.N. Nakamura, T.P. Terada, D.R. Gill, L. Lee, A. Olin, M. Salomon, S. Yen, K. Bartlett, G.A. Beer, G. Mason, G. Trayling, H. Outa, T. Taniguchi, Y. Yamashita, R. Seki, "Observation of Kaonic Hydrogen Kα X Rays", Physical Review Letters 78(16), 3067-3069 (1997-04-21).
T.P. Terada, R.S. Hayano, "Cascade calculation of hadronic hydrogen atoms", Physical Review C 55(1), 73-87 (1997-01-01).
M. Kuwata, H. Maeda, K. Husimi, S. Ohkawa, M. Iwasaki, S.N. Nakamura, T.M. Ito, T. Terada, "A Pulse-Processor Based on Rise Time Measurement of Trapezoidal Waveforms by Using a Count-Up ADC", IEEE Transactions on Nuclear Science 43(3), 1626-1628 (1996-06-01).
[Conference Proceedings]
S.N. Nakamura, K. Bartlett, G.A. Beer, D.R. Gill, R.S. Hayano, T.M. Ito, M. Iwasaki, L. Lee, G. Mason, A. Olin, H. Outa, M. Salomon, R. Seki, T. Taniguchi, T.P. Terada, G. Trayling, Y. Yamashita, S. Yen, "Observation of kaonic hydrogen atom X-ray", Hyperfine Interactions 118(1-4), 45-51 (1999-06-01).
M. Iwasaki, K. Bartlett, G.A. Beer, D.R. Gill, R.S. Hayano, T.M. Ito, L. Lee, G. Mason, S.N. Nakamura, A. Olin, H. Outa, M. Salomon, R. Seki, T. Taniguchi, T.P. Terada, G. Trayling, Y. Yamashita, S. Yen, "Discovery of the repulsive energy shift of the kaonic hydrogen 1s state", Nuclear Physics A 639(1-2), 501c-510c (1998-08-24).
M. Iwasaki, K. Bartlett, G.A. Beer, D.R. Gill, R.S. Hayano,T.M. Ito, L. Lee, F.E. Maas, G. Mason, S.N. Nakamura, A. Olin, M. Salomon, R. Seki, T. Taniguchi, T.P. Terada, G. Trayling, E. Widmann, Y. Yamashita, S. Yen, Y. Yonezawa, "Kaonic Hydrogen X-ray Experiment at KEK", Nuclear Physics A 585(1-2), 239c-246c (1995-03-13).
笹井理生, 寺田智樹, "真核細胞のルースな遺伝子制御とクロマチン動態", 生物物理(生物物理学会誌) 56(2), 106-108 (2016-03-31).
寺田智樹, "ランドスケープ描像で見る細胞分化の物理", 日本物理学会誌 70(10), 765-769 (2015-10-05).
寺田智樹, "アクトミオシンの粗視化モデル解析：モーター機能におけるループの柔らかさの重要性", 生物物理(生物物理学会誌) 55(3), 148-150 (2015-05-30).
笹井理生, 寺田智樹, "タンパク質のダイナミクスとインフォマティクス", 高分子(高分子学会誌) 51(6), 448 (2002-06-01).
笹井理生, 寺田智樹, "分子進化とフォールディング機構", 蛋白質 核酸 酵素 47(6), (2002年5月号) 677-683 (2002-05).
笹井理生, 寺田智樹, 「ゲノム系計算科学 - バイオインフォマティクスを越え, ゲノムの実像に迫るアプローチ」 第7章 (p.173-219), 「生体分子の作るシステム」共立出版 (2013-01-23).
笹井理生, 伊藤一仁, 千見寺浄慈, 寺田智樹, 「細胞の物理生物学」, 共立出版 (2011-12-22) (Rob Phillips, Jane Kondev, Julie Theriot "Physical Biology of the Cell", Garland Science (2008)の日本語訳).
プロフィール: 名大研究者DB,
researchmap,
ORCID,
ResearcherID,
ResearchGate
好きな言葉: (違うのを見る)